Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPRKVFSSQAYRHKVVLVSGGCSGIGRALALRFARAGARLAILDLDQAALDSLVQHLRDHLGGEALGLRCDVADADAVERAVALAVERFGGIDVLVNNAGITHRGTFAETGLGVFRKVMAVNFFGAVHCTRAALPS--LLER-RGQIVVLGSLTGFAPLLYRSAYNASKHALHGLFDTLRMELEGTGVSVTLACPGFTATDLRKNALVGDGSVTRQPVQVLGSQVASPVEVAEAIFQGAARRRRLLVLSNVNWRARLLARFFPRLFEKLLVPRLSGLKPQP
2RHR Chain:A ((23-210))
-------------EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA-GVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRLGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPM-------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2RHR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -146686 for 1552 contacts (-94.5/contact) +
2D Compatibility (PS) -20457 + (NN) -12172 + (LL) 7348
1D Compatibility (HY) -11600 + (ID) 3500
Total energy: -187067.0 ( -120.53 by residue)
QMean score : 0.542
(partial model without unconserved sides chains):
PDB file :
Tito_2RHR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2RHR-query.scw
PDB file :
Tito_Scwrl_2RHR.pdb
: