Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGKRIGLFGGTFDPVHIGHMRSAVEMAEQFALDELRLLPNARPPHRETPQVSAAQ-RLAMVERAVAGVERLTVDPRELQRDKPSYTIDTLESVRAELAADDQLFMLIGWDAFCGLPTWHRWEALLDHCHIVVLQRPDADSEPPESLRDLLAARSVADPQALKGPGGQITFVWQTPLAVSATQIRALLGAGRSVRFLVPDAVLNYIEAHHLYRAPH
3E27 Chain:C ((2-189))
--RKIGIIGGTFDPPHYGHLLIANEVYHALNLEEVWFLPNQIPPHKQGRDITSVESRLQMLELATEAEEHFSICLEELSRKGPSYTYDTMLQLTKKY-PDVQFHFIIGGDMVEYLPKWYNIEALLDLVTFVGVARPGY------KLRTPYPITTVEIPE----------------FAVSSSLLRERYKEKKTCKYLLPEKVQVYIERNGLYES--
General information:
TITO was launched using:
RESULT:
Template:
3E27.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -138856 for 1463 contacts (-94.9/contact) +
2D Compatibility (PS) -20097 + (NN) -10068 + (LL) 524
1D Compatibility (HY) -17200 + (ID) 3400
Total energy: -189097.0 ( -129.25 by residue)
QMean score : 0.474
(partial model without unconserved sides chains):
PDB file :
Tito_3E27.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3E27-query.scw
PDB file :
Tito_Scwrl_3E27.pdb
: