Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MISLERKGHAPTLLYERGIAERFREAIIRRYFSRGYLLDPFCLAVEEGLPEGFYTLGEIAPDDFFQSAYYQTYYLGAGAVEDVYYILDLGPTEKLSICLYNGLSASRYSDAQVAALAGLAPPVLELARQFCAGRADLSPNPQADLAPRLQEVLRGFGRGVLTDREREACHLLLSGHSAKSSARLMDISPETVRMHRKNLYTKLEVGSQSELFALFIECLSQGQRVGP |
1A04 Chain:A ((153-214)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------VNQLTPRERDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQER-------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1A04.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -26506 for 405 contacts (-65.4/contact) +
2D Compatibility (PS) -6793 + (NN) -3105 + (LL) 10492
1D Compatibility (HY) -2400 + (ID) 950
Total energy: -29262.0 ( -72.25 by residue)
QMean score : 0.705
|
|
|