Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLRKLAAVSLLSLLSAPLLAAECSVDIQGNDQMQFNTNAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKDSVTFDVSKLKEGEQYMFFCTFPGHSALMKGTLTLK
1XB6 Chain:B ((1-128))
--------------------AECSVDIQGNDQMQFNTNAITVDRSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKDSVTFDVSKLKEGEQYMFFCTFPGHSALMKGTLTLK
General information:
TITO was launched using:
RESULT:
Template:
1XB6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -66624 for 987 contacts (-67.5/contact) +
2D Compatibility (PS) -13673 + (NN) -4813 + (LL) 2324
1D Compatibility (HY) -16800 + (ID) 6350
Total energy: -105936.0 ( -107.33 by residue)
QMean score : 0.597
(partial model without unconserved sides chains):
PDB file :
Tito_1XB6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XB6-query.scw
PDB file :
Tito_Scwrl_1XB6.pdb
: