Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIRDTLHDLHRPLGDTGLAVSPLGLGTVKFGRDQGVKYPSGFTIPDDREAADLLALARDLGINLIDTAPAYGR----SEERLGPLLR----GQREHWVIVSKVGEEFVDGQSVFDFSAAHTRRSVERSLKRLETDRIELVLVHSDGNDLDILENSEVYPTLAALKREGLIGAYGLSGKTVEGGLRALR-------EGDCAMVTYNLNERA-ERPVIEYAAAHAKGILVKKALASGHACL---------------------GAGQDPVRASFELVFDQPGVAAAIVGTINPLHLAHNVAMAA-QALKKA |
| 3ERP Chain:A ((30-340)) | --RYHTMEY-RRCGRSGVKLPAISLGLWHNFGD----------TTRVENSRALLQRAFDLGITHFDLANNYGPPPGSAECNFGRILQEDFLPWRDELIISTKAGYTMWDGPYGDWGSRKYLIASLDQSLKRMGLEYVDIFYHHRPDPET---PLKETMKALDHLVRHGKALYVGISNYPADLARQAIDILEDLGTPCLIHQPKYSLFERWVEDGLLALLQEKGVGSIAFSPLAGGQLTDRYLNITADKLEKVRRLNELAARRGQKLSQMALAWVLRNDNVTSVLIGASKPSQIEDAVGMLANRRFSAA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ERP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -124486 for 2125 contacts (-58.6/contact) +
2D Compatibility (PS) -27266 + (NN) -10747 + (LL) 900
1D Compatibility (HY) -10800 + (ID) 3050
Total energy: -175449.0 ( -82.56 by residue)
QMean score : 0.533
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