Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIIIRLDVILAKNKVRSKELAEAIGITEQNLSLLKNGKVKGIRLDTLEKICAFLDCQPGDILEYVADD
3VK0 Chain:A ((22-85))
-LAYNMRLFRVNKGWSQEELARQCGLDRTYVSAVERKRWN-IALSNIEKMAAALGVAAYQLLLPPQ--
General information:
TITO was launched using:
RESULT:
Template:
3VK0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53199 for 423 contacts (-125.8/contact) +
2D Compatibility (PS) -6980 + (NN) -4530 + (LL) -116
1D Compatibility (HY) -5200 + (ID) 600
Total energy: -70625.0 ( -166.96 by residue)
QMean score : 0.717
(partial model without unconserved sides chains):
PDB file :
Tito_3VK0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3VK0-query.scw
PDB file :
Tito_Scwrl_3VK0.pdb
: