Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQGLNHTSVSEFILVGFSAFPHLQLMLFLLFLLMYLFTLLGNLLIMATVWSERSLHMPMYLFLCALSITEILYTVAIIPRMLADLLSTQRSIAFLACASQMFFSFSFGFTHSFLLTVMGYDRYVAICHPLRYNVLMSLRGCTCRVGCSWAGGLVMGMVVTSAIFHLAF-CGHKEIHHFFCHVPPLLKLACGDDVLVVAKGVGLVCITALLGCFLLILLSYAFIVAAILKIPSAEGRNKAFSTCASH-LTVVVVHYGFASVIYLKPKGPQSPEGDTLMGITYTVLTPFLSPIIFSLRNKELKVAMKKTCFTKLFPQNC |
1B12 Chain:A ((2-248)) | ----RSFIYEPFQIPSGSMMP----------------TLLIGDFILVEKF--------------AYGIKDPIYQKTLIETG-----HPKRG-------DIVVFKYPEDPKLDYIKRAVGLPGDKVTYDPVSKELTIQ-PGCSSGQACENALPVTYSNVEPSDFVQTFSRRNGGEATSGFFEVPKNETKE---------NGIRLSERKETLG----------DVTHRILTVPIAQDQVGMYYQQPGQQLATWIVPPGQYFMM-----------GDNRDNSADSRYWGFVPEANLVGRATAIWMSFDGLRLSRIGGIH- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1B12.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -225939 for 1767 contacts (-127.9/contact) +
2D Compatibility (PS) -25005 + (NN) 580 + (LL) 7844
1D Compatibility (HY) -4000 + (ID) 2000
Total energy: -248520.0 ( -140.65 by residue)
QMean score : 0.165
|
|
|