Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------MKTLCSFLQISRNMHQENQTTITEFILLGLSNQAEHQNLLFVLFLSMYVVTVVGNGLIIVAISLDIYLHTPMYLFLAYLSFADISSISNSVPKMLVNIQTN-SQSISYESCITQMYFSIVFVVTDNLLLGTMAFDHFVAICHPLNYTTFMRARFGTLLTVISWFLSNIIALTHTLLLIQLLFCDHNTLPHFFCDLAPLLKLSCSDTMINELVLFIVGLSVIIFPFVLIFFSYVCIIRAVLGVSSTQGKWKAFSTC-GSHLTIALLFYGTTVGVYFFPSSTHPEDTDKIGAVLF-------TVVTPMMNPFIYSLRNKDMKGALRKLINRKISSL |
| 4UX8 Chain:C ((25-343)) | DRLDCVKASDQCLKEQSCSTKYRTLRQCVAGKET-NFSLTSGLEAKDECRSAMEALKQKSLYNCRCKRGMKKEKNCLRIYWSMYQSKGNNCLDAAKACNLDDTCKKYRSAYITPCTTSMSNEVCNRRKCHKALRQFFDKVP-AKHSYGMLFCSCRDIACTERRRQTI-------------------------VPVCSYEERERPNCLS---LQDSCKTN-------------------------YICRSRLADFFTNCQPESRSVSNCLKENYADCLLAYSGLIGTVMTPNYV---DSSSLSVAPWCDCSNSGNDLEDCLKFLNFFKDNTCLKNAIQAFGNG----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UX8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -179159 for 1861 contacts (-96.3/contact) +
2D Compatibility (PS) -26543 + (NN) 811 + (LL) 6708
1D Compatibility (HY) 800 + (ID) 2200
Total energy: -199583.0 ( -107.25 by residue)
QMean score : 0.118
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