Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------MGDNITSITEFLLLGFPVGPRIQMLLFGLFSLFYVFTLLGNGTILGLISLDSRLHAPMYFFLSHLAVVDIAYACNTVPRMLVNLLH------------PAKPISFAGRMMQTFLFSTFAVTECLLLV--VMSYDLYVAICHPLRYLAIMTWRVCITLAVTSWTTGVLLSLIHLVLLLPLPFCRPQKIYHFFCEILAVLKL----------ACADTHINE-------------NMVLAGAISGLVGPLSTIVVSYMCILCAILQI-----QSREVQRKAFCTCFSHLCVIGLF-YGTAIIMYVGPRYGNPKEQKKYLLLFHSLFNPMLNPLICSLRNSEVKNTLKRVLGVERAL---------- |
| 3EWE Chain:B ((65-555)) | MPLKFKLGPLSYQNMAFITKYKLYPVRIPRLDTSKEFSAYVSGLFEIYRDLGDKEHNATVNLAMEAILNELEVFIGRVKDVNRFYELEESLTVLNCLRTMYFILNRSEFIESLLNWINRSDGEPDEEYIEQVETQYFWKLLNQLVLRGLLSQAIGCIERSDLLCAVSFDAVSDSIELLTFREWKNLVLKLSQAFSGELRDYIEDFLLVIGGNQRKILQYSRTWYESFCGFLLYYIPSLELSAEYLQMSLEANVVDITNDWEQPCVDIISGKIHSILPVMESLDSCTAAFTAMICEAKGLFSYRNGMASYMLNSFAFELCSLGDKELWPVAIGLIATRSAKKMVIAELLPHYPFVTNDDIEWMLSICVEWRLPEIAKEIYTTLGNQMLSAHNIIES |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EWE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -302335 for 2168 contacts (-139.5/contact) +
2D Compatibility (PS) -31196 + (NN) -3818 + (LL) 0
1D Compatibility (HY) -5200 + (ID) 1300
Total energy: -343849.0 ( -158.60 by residue)
QMean score : 0.287
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