Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------MERKNQTAITEFIILGFSNLN----ELQFLLFTI-----------FFLTYFCTLGGNILIILTTVTDPHLHTPMYY--------FLGNLAFIDICYTTSNVPQMMVHLLSKKKSISYVGCVVQLFA----FVFFVGSECLLLAAMAYDRYIA----ICNPLRYSVIL---SKVLCNQLAASCWAAGFLNSVVHTVLTFCLPFCGNNQINYFFCDIPPLLILSCGNTSVNELALL-STGVF--IGWTPFLCIVLSYICIISTILRIQSSEGRRKAFSTCASHLAIVFLFYGSAIFTYVRPISTYSLKKDRLVSVLYSVVTPMLNPIIYTLRNKDIKEAVKTIGSKWQPPISSLDSKLTY----------- |
| 1A6Q Chain:A ((2-368)) | GAFLDKPKMEKHNAQGQGNGLRYGLSSMQGWRVEMEDAHTAVIGLPSGLESWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGGSVMIQRVNGS-------LAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLYKGSRDNMSVILICFPNAPKVSPEAVKKEAELDKYLECRVEEIIKGVPD-------LVHVMRTLASENIPSLPPGGELASKRNVIEAVYNRLNPY |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1A6Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -350478 for 2570 contacts (-136.4/contact) +
2D Compatibility (PS) -31795 + (NN) 2508 + (LL) 1324
1D Compatibility (HY) -1600 + (ID) 1950
Total energy: -381991.0 ( -148.63 by residue)
QMean score : 0.140
|
|
|