Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVKITINSQECEVKPGLTIIQACETVGVEIPRFCYHERLAIAGNCRMCLVEVKGGPPKPVASCAMPVAEGMVIYTDTPKVKKAREGVLEFLLINHPLDCPICDQGGECDLQDITVVYGKGNSRFDEHKRAIPKKHFGQLIEAAMNRCIHCTRCIRFLSDVAGTNELGGIGRGENMEISTYIKKHISSELSGNIIDLCPVGALTSKPYSFTARPWELSHCETIDVLDAVGSSIRVDYRGPEVMRILPRLNEEVNEEWISDKTRFAYDG-LKVQRLDQPYIKRD---------------NRLVPADWNEALTVAAKKLRS----TKPNKIAAIA-GDLADCESMLLLKEIMQKLGS--SNIDCRQDGAKLI------PNNRGSYV---FNTTIEGIENVDLCLLINTNPKVEAPII-----------NARIRKRYLQGNFPIASIGPD-IEYLYH-VEKL-----GNNPGVLNEIAKGN--HK------------------------------------------------FCKLLSAAQNPMLIIGQDALTRDDSES-ILALAGAIAEK-FNMVRNDWNGFNVLHKAAARV-----GGLDIGFVPKKD------------------GKNINQIL--------------EQAESGEIEVVYLLGAD-EIN------T--LKLENAFVIYQGHHGDRGAHMADIILPGAAYTEKYATYV---NTEGRVQRAKLAVSPPGEAKEDWSIIKNLSQYLGLSLPYDSLFDVRKKLDAIGPQFRNTDQVVKNKWMSITCNEIKLSSVPFFLKECNFYMTDSISRASKIMANCTKAFYEHAS |
| 1TMO Chain:A ((36-564)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------N--EDE--------WLTTGSHFGAFKMKRKNGVIAEVKPFDLDKYP----TDMINGIRGMVYNPSRVRYPMVRLDFLLKGHKSNTHQRGDFRFVRVTWDKALTLFKHSLDEVQTQYGPSGLHAGQTGWRATGQLHSSTSHMQRAVGMHGNYVKKIGDYSTGAGQTILPYVLGSTEVYAQGTSWPLILEHSDTIVLWSNDPYKNLQVGWNAETHESFAYLAQLKEKVKQGKIRVISIDPVVTKTQAYLGCEQLYVNPQTDVTLMLAIAHEMISKKLYDDKFIQGYSLGFEEFVPYVMGTKDGVAKTPEWAAPICGVEAHVIRDLAKTLVKG-RTQFMMGWCIQRQQHGEQPYWMA-AVLATMIGQIG-LPGGGISYGHH-YSSIGVPSSGAAAPGAFPRNLDENQKPLFDSSDFKGASSTIPVARWIDAILEPGKTIDANGSKVVYPDIKMMIFSGNNPWNHHQDRNRMKQAFHKLECVVTVDVNWTATCRFSDIVLPACTTYERNDIDVYGAYANRGILAMQKMVEPLFDSLSDFEIFTRFAAVLGKEKEYTRNMGEMEWLETLYNECKAANAGKFEMPDFATFWKQGYVHFGDGEVWTRHADFRNDPEINPLGTPSGLIEIFSRK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TMO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -98550 for 2642 contacts (-37.3/contact) +
2D Compatibility (PS) -39937 + (NN) -16284 + (LL) 14668
1D Compatibility (HY) -6000 + (ID) 2850
Total energy: -148953.0 ( -56.38 by residue)
QMean score : 0.290
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