Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTNILYRIDKQLSDFTKTEKIIADYILKNPHKIIDMTVN-------DLADVTNVSTASIVRFSRKMTHQGFQELKIAI----SRYLPEDIATNPHLE------------LIENESVETLKNKMIARATN------TMRFVATNIMDAQIDAICDVLK------NARTIFLFGFGASSLTIGDLFQKLSRIGLNVRLLHETHLLVSTFATHDDRDCMIFVTNQGSHSELQS---IAQVATHYSIPIITISSTANNPVAQ----IADYALIYGRTDENEMRMAATTSLFAQLF----TVDILYYRFVALNYHAILDCITQSKMALDNYRKHLATIDFKH |
| 4Q05 Chain:A ((34-360)) | -ENSWQIGPRTLPAPSGASDVLYNIISKTPTPVPTINLNLVPRTESEWRAAITQLDEGKVDMAREISKQLSVSVEHGVIEGVSVYYVTPVEVAPDLEDKLFVHTHGGAFVLNGGEAGTIEAIVIATLAKVRVLSIDYRMPPSHPAPAARDDVFTVYQHLLKQGSAQKIALGGSSGGANLTMGLVQHLIEQEVDLP----GALFLGTPGADMSKTGDSYYINDGIDRNLVTYDGFLEAAVRLYANGRDLKDPLVSPLYGDLHGFPPTFLITGTRD---LLLSATVRTHIKLRQSGVVADLFVYEGIAHGDYAVDLTAPETQHAFAELNAFLLQH-LR- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q05.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -136896 for 2307 contacts (-59.3/contact) +
2D Compatibility (PS) -29487 + (NN) -6149 + (LL) 804
1D Compatibility (HY) -7600 + (ID) 2400
Total energy: -181728.0 ( -78.77 by residue)
QMean score : 0.231
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