Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIALGCDHIVTDTKMRVSEFLKSKGHEVIDVGTYDF-TRTHYPIFGKKVGEQVVSGNADLGVCICGTGVGINNAVNKVPGVRSALVRDMTSALYAKEELNANVIGFGGRI--IGELLMCDIIDAFINAEYKATEENKKLIAKIKHLETSNADQADPHFFDEFLEKWDRGEYHD
1USL Chain:B ((12-150))
MRVYLGADHAGYELKQRIIEHLKQTGHEPIDCGALRYDADDDYPAFCIAAATRTVADPGSLGIVLGGSGNGEQIAANKVPGARCALAWSVQTAALAREHNNAQLIGIGGRMHTVAEALA--IVDAFVTTPWSKAQRHQRRI---------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1USL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -113815 for 1182 contacts (-96.3/contact) +
2D Compatibility (PS) -14255 + (NN) -3087 + (LL) 1824
1D Compatibility (HY) -4800 + (ID) 2550
Total energy: -136683.0 ( -115.64 by residue)
QMean score : 0.508
(partial model without unconserved sides chains):
PDB file :
Tito_1USL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1USL-query.scw
PDB file :
Tito_Scwrl_1USL.pdb
: