Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYDYDEPLYLISVVAKILGVHPQTSRQYEKEGLIEPSRTDGKMRLYSQRDMDKIKTILRLTRDMGVNLAGVDIILRLKEKLDELDNLNKELQDALHKHSKNTKTPTKNLNT-----PTNFYELILFKK
2ZHG Chain:A ((10-135))
------ALLTPGEVAKRSGVAVSALHFYESKGLITSIRNSGNQRRYKRDVLRYVA-IIKIAQRIGIPLATIGEAFGVTLSAKEWKQLSSQWREELDRRIHTLVALRDELDGCIGCGCLSRSDCPLRNP
General information:
TITO was launched using:
RESULT:
Template:
2ZHG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21147 for 720 contacts (-29.4/contact) +
2D Compatibility (PS) -11931 + (NN) -397 + (LL) 396
1D Compatibility (HY) -4800 + (ID) 1200
Total energy: -39079.0 ( -54.28 by residue)
QMean score : 0.442
(partial model without unconserved sides chains):
PDB file :
Tito_2ZHG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZHG-query.scw
PDB file :
Tito_Scwrl_2ZHG.pdb
: