Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------MKLTGIHHVSIFTANARANFDFYTKIMGLRLVKKSVNQDDPYTYHLYYGDEIGSPGTALTFFEVPNMAKNHPSRNAISGLSLRVPSDEALHYWDKRLDEH--RIFHSKPIDQFG-RKIIRLKDTDGLPVNLISDETSTQVTEVTPWEDSLVPAEYAIRGLGPVRFSVFKKEKTDRLLTKILGFERIGAYEDDDKLVTVFKTGNVGLGGEVHVESRPDLEQGNLGAGGIHHVAFRVPTDGDLIGWTEMIQDLGYKNSGYVDRFYF-----HSLYFRESNGILIELATDE-------------------------PGFQTDFTKEHGTYVDLPPHLEERREDILAHLKPLDTDK----------------------- |
| 1Q0O Chain:A ((4-359)) | EIPKPVAPAPDILRCAYAELVVTDLAKSRNFYVDVLGLHVSYE-----DENQIYLRSFEEFIHHNLVLTK----------GPVAALKAMAFRVRTPEDVDKAEAYYQELGCRTERRKDGFVKGIGDALRVEDPLGFPYEFFFETTHVERLHMRYDLYS----AGELVRLDHFNQVTPDVPRGRKYLED-LGFRVTEDIQDDEGTTYAAWMHRKGTVHDTALTGGN--------GPRLHHVAFSTHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDNHRIEIYTQDYYTGDPDNPTITWNVHDNQRRDWWGNPVVPSWYTEASKVLDLDGNVQEIIERTDDSELEVTIGADGFSFTRAGDEDGSYHGQASKGF |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Q0O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -76568 for 2460 contacts (-31.1/contact) +
2D Compatibility (PS) -31338 + (NN) -12334 + (LL) 1368
1D Compatibility (HY) -6400 + (ID) 2400
Total energy: -127672.0 ( -51.90 by residue)
QMean score : 0.436
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