Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MKISKRLQNLP----DQFFSSLVEKVGKKVAEGHDVINLGQGNPDQPTPKHIVEAMKTASEKPLNHK-----YSLFRGKQELKQAAADFYAREYNVTIDPN----TEVAILFGTKTGLVELPMCLMDPGDTMLLPDPGYPDYLSGVVL-GEVQFEKMPLI-AENDFLPDFTKIPEDIAEKTELMYLNYPNNPTGAVATADFFEETVAFAKNHNIVVAHDFAYGGIGFDGK-------KPISFLETNGAKEVGIELYTLSKTYNMAGWRVGFAVG-NSEVIEAINLIQDHMYVSLFPGIQDAAIEAL---TGDQACVRELTARYENRRDAFISACREIG-----WEAVAPAGSFFAWMPVPEDF----TSSEFADYLLEEVSVAVADGSGFGEFGEGYVRVGLLMDEERLEEAVTRVSKLHLFDKVTQQ |
| 1BJW Chain:A ((1-382)) | MRGLSRRVQAMKPSATVAVNAKALELRRQ----GVDLVALTAGEPDFDTPEHVKEAARRALA------QGKTKYAPPAGIPELREALAEKFRRENGL-----SVTPEETIVTVGGKQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGV-VVEVET-LPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEG-EHFSPGR---------VAPEHTLTVNGAAKAFAMTGWRIGYACGP-KEVIKAMASVSSQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTAL-GLKAV----RPSGAFYVLMDTS---PIAPDEVRAAERLLE-AGVAVVPGTDFAA--FGHVRLSYATSEENLRKALERFARVL-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1BJW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -185625 for 2910 contacts (-63.8/contact) +
2D Compatibility (PS) -37978 + (NN) -21363 + (LL) 2812
1D Compatibility (HY) -17600 + (ID) 5300
Total energy: -265054.0 ( -91.08 by residue)
QMean score : 0.621
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