Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------------------------------------------------------------------------------------------------------------------------------------------MADISKELIEQLVKQVVLEKMGQSSKHVDPSGILSVKL--PVVKVSEEDRLDTGNPSDVVYTKDLVTLEESKRLGFGLMEMK-------DTTFDWFLDYDEVDYVIEGRLDVVI-DGRTVSAGPGEIIFIPKGSQIKFSVTGE-ARFIYVTYPADWQS------------------- |
| 1JUH Chain:A ((3-350)) | SSLIVEDAPDHVRPYVIRHYSHARAVTVDTQLYRFYVTGPSSGYAFTLMGTNAPHSDALGVLPHIHQKHYENFYCNKGSFQLWAQSGNETQQTRVLSSGDYGSVPRNVTHTFQIQDPDTEMTGVIVPGGFEDLFYYLGTNATDTTHTPYIPSISTLQSFDVYAELSFTPRTDTVNGTAPANTVWHTGANALASTAGDPYFIANGWGPKYLNSQYGYQIVAPFVTATQAQDTNYTLSTISMSTTPSTVTVPTWSFPGACAFQVQEGRVVVQIGDYAATELGSGDVAFIPGGVEFKYYSEAYFSKVLFVSSGSDGLDQNLVNGGEEWSSVSFPADW |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JUH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -24746 for 924 contacts (-26.8/contact) +
2D Compatibility (PS) -15455 + (NN) -330 + (LL) 0
1D Compatibility (HY) 400 + (ID) 1350
Total energy: -41481.0 ( -44.89 by residue)
QMean score : 0.256
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