Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKHIRVAAIIRHQNKILLHTTKNENYWTLPGGAVE-NELTKEGLQREMREELGEEVTIRELK-IIAENRFV--------------YRGEEMDSIEFYYIVELYPNSALLELSTFTKIEQFGQNGETDYELNFKWFEIDKVSEIEILPKFLQTELTQLSSDRIKHIQ
1K2E Chain:A ((2-134))
---IVTSGVLVENGKVLLVKHKRLGVYIYPGGHVEHNETPIEAVKREFEEETGIVVEPIGFTYGIIDENAVERPMPLVILEEVVKYPEETHIHFDLIYLVKRVG----------------------GDLKNGEWIDVREIDRIETF-PNVRKVVSLALS-------
General information:
TITO was launched using:
RESULT:
Template:
1K2E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -67013 for 787 contacts (-85.1/contact) +
2D Compatibility (PS) -12152 + (NN) 317 + (LL) 2188
1D Compatibility (HY) -7200 + (ID) 1500
Total energy: -85360.0 ( -108.46 by residue)
QMean score : 0.311
(partial model without unconserved sides chains):
PDB file :
Tito_1K2E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1K2E-query.scw
PDB file :
Tito_Scwrl_1K2E.pdb
: