Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIGIDKIGFYTPAFYVDMVELAEARNIDPNKFTIGIGQDKMAFAPITQDSVTMGANAALQILD--EEDLKKIDLVILATESGIDESKAGAVYIHRLLGIQPFSRAIEIKEACYGATAGINLAKDYVAKHPDSKVLVIGSDIARYGLA---TGGEATQGAGAVAMVIAADPRCITLEDDNVFYTE-DIMDFWRPVYSEYACVEGKYSTEQYIHFFQTIWEKYSAKFGKNLEDFAAICFHLPYTKMGKKALDTIIETAPSDVQEKLLENYRLSTLYSRNVGNIYTGSLYLSFISLLDNQPDLQAEDKIGFFSYGSGAVGEFFHGVLQPDYKKYIRKDEHAELLANRTKLAIPDYETKFKQQLPKDGSIFEVDPASDPAAIVLTGIQEHKRQYIKK |
| 2EBD Chain:A ((1-309)) | MGTKIIGTGVYLPKNVLTNFDLEKIVDTSDEWITTRTGIKERRIAK-EETITYMATQAAKEALREANLSPEELDLIILATLTPQKRFPSTACLVQAQLKAK-GVYAFDISAACSGFIYALDIADSFIKSGKAKNVLVIGAEKLSEAVDWEDRSTCVLFGDGAGAVVVTRSEDKSDILA-TRMYAEGSLEELLHADNCGYIRMKGRELFKVAVRSMEEVCREVLEKAGVKPEEVSLVIPHQANVRIINALAEKLNIP---------KEKVFV---NIQKYGNTSAASIPIALHEAIKEG-KVKRGDLILMTAMGGGLTWGAVLLRY--------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2EBD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -226961 for 2852 contacts (-79.6/contact) +
2D Compatibility (PS) -31851 + (NN) -6748 + (LL) 5256
1D Compatibility (HY) -7600 + (ID) 2650
Total energy: -270554.0 ( -94.86 by residue)
QMean score : 0.430
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