Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNFEKIETAYELILENIQTIENQLKTHIYDALIEQNSYYLGSSCDLDIVVVNNQKLRQLDLSQEEWRRTFQFIFIKSAQTEQLQANHQFTPDSIGFILLFLLEELTSQETVDVLEIGSGTGNLAQTLLNNSSK-------------------------------------ELNYMGIEVDDLLIDLSASIAEIIGS--SAQFIQEDAVRPQILKESDVIISDLPIGYYPNDDIAKRYAVSSSKEHTYAHHLLMEQSLKYLKKDGIAIFLAPENLLTSPQSDLLKEWLKGYADVIAVLTLPETIFGSRQNAKSIFVLKKQAEQKPETFVYPLTDLQNRENMANFIENFQKWSRENSHYSKNMIE |
| 3LDU Chain:A ((194-372)) | -----------------------------------------------------------------------------------------------------------KAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKSEDEFGFIITNPPYGERLEDKD----------SVKQLYK-ELGYAFRKLKNWSYYLITSYEDFEYEFGQKADKKRKLYNGMLKTNFFQYPGPKPPRN------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LDU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -41821 for 1011 contacts (-41.4/contact) +
2D Compatibility (PS) -14569 + (NN) -3291 + (LL) 14536
1D Compatibility (HY) 1200 + (ID) 1150
Total energy: -45095.0 ( -44.60 by residue)
QMean score : 0.299
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