Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------MKDKQFKEESSDLVYGLHAVTESLRANTGNKLYLQDDLRGKNVDKVKALATEKKVSISWTPKKILSDMTNGGVHQGFVLKVSEFAYADLSEIMTKAENEENPLILILDGLTDPHNLGSILRTADATNVTGIIIPKHRSVGVTPVVSKTSTGAVEHVPIARVTNLSQTLDTLKDKDFWIFGTDMNGTPSHKWNT-KGKLALVIGNEGKGISHNIKKQVDEMITIPMNGHVQSLNASVAAAILMYEVFRNRL- |
| 1IPA Chain:A ((1-263)) | MRITSTANPRIKELARLLERKHRDSQRRFLIEGAREIERALQAGIELEQALVWE---GGLNPEEQQVYAALLALLEVSEAVLKKLSVRDNPAGLIALARMPERT-----LEEYRPSPDALILVAVGLEKPGNLGAVLRSADAAGAEAVLVAGGVDL-YSPQVIRNSTGVVFSLRTLA-ASESEVLDWIKQHNLPLVATTPHAEALYWEANLRPPVAIAVGPEHEGLRAAWLEAAQTQVRIPMQGQADSLNVSVSAALLLYEALRQRLL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IPA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -95769 for 1910 contacts (-50.1/contact) +
2D Compatibility (PS) -25873 + (NN) -10049 + (LL) 504
1D Compatibility (HY) -10400 + (ID) 2700
Total energy: -144287.0 ( -75.54 by residue)
QMean score : 0.498
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