Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNLDILYCKLAMCTTLLTERLRLQPVDLSNINDFLEFSSDSETVFYMQRYKA--NTTEEAQMVLANVCMKSPLGIYAMIETESNKMIGIIELEIRD--EFSAEFGYILNKNYSGKGYMTEACSKLMSVGFEYLDLERIYARFDINNKKSGNVMERLGMKKEGELRHLAKNP-KGEWKTRAYYSILKEEYFNKVNTK
2Z10 Chain:A ((6-182))
--------------ERFEGRHVRLEPLALAHLPAFLRH-YDPEVYRF-LSRAPVAPTEEALRAHLEGLLGEPGRVNWAIL--FGKEVAGRISVIAPEPEHAKLELGTMLFKPFWGSPANKEAK-LLLRHAFEVLRAERVQFKVDLRNERSQRALEALGAVREGVLRKN-RRLPDGAFRDDVVYSVLKEEWPGVKARL
General information:
TITO was launched using:
RESULT:
Template:
2Z10.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -65805 for 1267 contacts (-51.9/contact) +
2D Compatibility (PS) -17936 + (NN) -2962 + (LL) 1828
1D Compatibility (HY) -6000 + (ID) 2200
Total energy: -93075.0 ( -73.46 by residue)
QMean score : 0.419
(partial model without unconserved sides chains):
PDB file :
Tito_2Z10.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Z10-query.scw
PDB file :
Tito_Scwrl_2Z10.pdb
: