Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKLVATDMDGTFLDENGTYDKKRLANVLKKFKEQGIVFTAASGRSLLSLEQLFADFRDQMAFIAENGSAAVLF-NRLAYEQHLSREQYLDIIDHLSKSPYMENNEYVLSGKDGAYILSDANPDYIEF-ITHYYDN---------------------LQKVSHFEDV---D--DIIFKVTANF-TEETVRQAEEWVNQAIPYTTAVTTGFKSIDIILSSVNKRNGLEHLCEQYGIRAEEVLSFGDNINDLEMLEWSGKAIATENARPEVKEIADCIIGHHNNQAVMAYLESMVD |
| 1NRW Chain:A ((4-288)) | -MKLIAIDLDGTLLNSKHQVSLEN-ENALRQAQRDGIEVVVSTGRAHFDVMSIFEPLGIKTWVISANGAVIHDPEGRLYHHETIDKKRAYDILSWLESE----NYYYEVFTGSAIYTPQNGRE-LLDVELDRFRSANPEADLSVLKQAAEVQYSQSGFAYINSFQELFEADEPIDFYNILGFSFFKEKLEAGWKRYE-HAEDLTLVSSAEHNFELSSRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKSIADAVTLTNDEHGVAHMMKHLL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NRW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -125524 for 2291 contacts (-54.8/contact) +
2D Compatibility (PS) -28200 + (NN) -11402 + (LL) 616
1D Compatibility (HY) -11600 + (ID) 2800
Total energy: -178910.0 ( -78.09 by residue)
QMean score : 0.489
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