Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MMKKEDYMALALKEAEKGMGFVAPNPLVGAVIVKDDRIISKGYHKRFGDLHAERQAIKNAD---EDISGSTLYVTLEPCCHVGKQPPCTEALIKSGIKKVVVGSLDPNPLVSGKGIALLRKECLNVEVGILREECDALNERFIFHMTYKQPFVYLKYAMTLDGKIATKTGDSKWISNEHSRQSVQKLRQKCSAIMVGINTVLADNPRLTCRIPKGEALVRIVCDSQLKIPLD-SYLVKSAKTIPTWIATCSDNLAQQQTLKEMGCRLIKVPRKDGKLDLKVLMTILGQEGIDSLLIEGGSSLHFSALKAGIVNRLIVFIAPKIIGGLKAKTAISGEGLDWLNQDFRVKDIELSRMDSDVVIEGKVEHYVYRNY |
2HXV Chain:A ((12-357)) | -HMYETFMKRAIELAKKGLGRVNPNPPVGAVVVKDGRIIAEGFHPYFGGPHAERMAIESARKKGEDLRGATLIVTLEPCDHHGKTPPCTDLIIESGIKTVVIGTRDPNPV-SGNGVEKFRNHGIEVIEGVLEEEVKKLCEFFITYVTKKRPFVALKYASTLDGKIADHRGDSKWITDK-LRFKVHEMRNIYSAVLVGAGTVLKDNPQLTCRLKEGRNPVRVILDRKGVLSGKVFRVFEEN--ARVIVFTESEEAEY-----PPHVEKAL-----SDCSVESILRNLYERDIDSVLVEGGSKVFSEFLDH--ADVVFGFYSTKIFGKG--LDVFSGYLS-DVSVPPKFKVVNVEFSDSEFLVEMRPC------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HXV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -179281 for 2922 contacts (-61.4/contact) +
2D Compatibility (PS) -37738 + (NN) -20203 + (LL) 1928
1D Compatibility (HY) -22400 + (ID) 7000
Total energy: -264694.0 ( -90.59 by residue)
QMean score : 0.547
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