Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------MTKYQETAKAILAAVGGE--------KNIQHVTHCVTRLRLVLDNDEIVNDQVIKTIPNVIGVMRKN-------DQYQIILGNDVNNY------YNAFLALGHFENTTREFSSQKK---------------SSILEKLIETIAGVITPLIPALLG-GGMLKVIGILLPMLGI------------ASSSSQTVAFINF--------FGDAAYYFMP----IMIAYSAASRF----KVTPVLAATVGGILLHPAFVTMVAEGKPLSLFGAPVTLAS--------YGSSVIPILIMVFLMQYIERWINK----IVPSVMKSFLQPTLIILISGFLAL------VVVGPLGVII---GKGLSSAMLSIYHVAPW--LALSILGAIMPLVVMTGMHWAFAPIFLAAS-----VATPDVLILPAMLAS--NLAQGAASLAVAV-------KAKQKQTRQVAFAAGLSALLAGITEPALYGV-----TLKFKKPLYAAMISGGLVGAYIGLVNIASYTFVV------PSIIGLPQYIN--PQGGNNFSNAVIAAIA---------------TIILTFIITWFLGIDEGENEKSSINAQEHTHIRSGLSKKETLYSPMVGNVLPLSKVPDETFSS---------------KLLGEGLAITPSVGEVYAPFDGEIISLFPTKHAIALKDDKGVEVLIHIGIDTV---------ELNGEGFEQLVKVG-DFVKRGQLLLRMDIDFISSKGYSLISPVVVTNSIDQLEIIVKDAETMVTNEDDL-----------------LVIL---------- |
| 4CR2 Chain:Z ((49-993)) | LELLVERLKEDDSSLYEASLNALKESIKNSTSSMTAVPKPLKFLRPTYPDLCSIYDKWT--DPNLKSSLADVLSILAMTYSENGKHDSLRYRLLSDVSDFEGWGHEYIRHLALEIGEVYNDQVEKDAEDETSSDGSKSDGSAATSGFEFSKEDTLRLCLDIVPYFLKHNGEEDAVDLLLEIESIDKLPQFVDENTFQRVCQYMVACVPLLPPPEDVAFLKTAYSIYLSQNELTDAIALAVRLGEEDMIRSVFDATSDPVMHKQLAYILAAQKTSFEYEGVQDIIGNGKLSEHFLYLAKELNLTGPKVPEDIYKSHLDNSKSVFSSAGLDSAQQNLASSFVNGFLNLGYCNDKLIVDNDNWVYKTKGDGMTSAVASIGSIYQWNLDGLQQLDKYLYVDEPEVKAGALLGIGISASGVHDGEVEPALLLLQDYVTNPDTKISSAAILGLGIAFAGSKNDEVLGLLLPIAASTDLPIETAAMASLALAHVFVGTCNGDITTSIMDNFLERTAIELKTDWVRFLALALGILYMGQGEQVDDVLETISAIEHPMTSAIEVLVGSCAYTGTGDVLLIQDLLHRLTLAYAVLGIALIALGEDIGKEMSLRHFGHLMHYGNEHIRRMVPLAMGIVSVSDPQMKVFDTLTRFSHDADLEVSMNSIFAMGLCGAGTNNARLAQLLRQLASYYSRE-QDALFITRLAQGLLHLGKGTMTMDVFNDAHVLNKVTLASILTTAVGLVSPSFMLKHHQLFYMLNAGIRPKFILALNDEGEPIKVNVRVGQPVLLNHGERAELETDEYISYTSHIEGVVILKKNPDYREEE |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4CR2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -391563 for 4754 contacts (-82.4/contact) +
2D Compatibility (PS) -63873 + (NN) -4211 + (LL) 440
1D Compatibility (HY) -33200 + (ID) 5050
Total energy: -497457.0 ( -104.64 by residue)
QMean score : 0.182
|
|
|