Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLIGIVGTNSNK--STNRQLLQYMQQHFAD---KAEIELIEVKDL--PL-----------FNKPAD---------KN-VPQVILDIAAKIEEADGVIIGTPEYDHSIPSALMSVLAWLSYGI-----------YPLLNKPVMITGASYGTL-GSSRAQLQLRQILNAPELKASVLPDEFLLSHSLQAFDKDGNLHDIETSQKLDAIFDDFRLFVKITGKLSNARDLLQKEAENFDWESL |
| 2HPV Chain:A ((2-179)) | SKLLVVKAHPLTKEESRSVRALETFLASYRETNPSDEIEILDVYAPETNMPEIDEELLSAWGALRAGAAFETLSENQQQKVARFNELTDQFLSADKVVIANPMWNLNVPTRLKAWVDTINVAGKTFQYTAEGPKPLTSGKKALHIQSNGGFYEGKDFASQYIKAILNF--IGVDQVDGLFIEGIDHFPDRAEELLNTAMTKATEYGKTF------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HPV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -69554 for 995 contacts (-69.9/contact) +
2D Compatibility (PS) -15245 + (NN) -6928 + (LL) 1756
1D Compatibility (HY) -4800 + (ID) 1250
Total energy: -96021.0 ( -96.50 by residue)
QMean score : 0.534
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