Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIGIDKIGFATSQYVLEMTDLAIARQ-V-----------DPEKFSKGLLLDSLSITPV-------------------------TEDIVTLAASAANDILS--DEDKETIDMVIVATESSIDQSKAASVYVHQLLEIQPFARSFE-MKEACYSATAALDYAKLHVEKHPDSKVLVIASDIAKYGIK---------STGESTQGAGSIAMLISQNPSILE----LKE-DRLAQ-TRDIMDFWRPNYSDVPYVNGMFSTKQYLDMLKTTWKEYQKRF----NTSLSDYAAFCFHIPFPKLALKGFNKILDNNLDEQKKAELQENFEHSITYSKKIGNCYTGSLYLGLLSLLEN----SQNLKAGD---QIAFFSYGSGAVAEIFTGQLVDGYQNKLQSDRMDQLNKRQKITVTEYEKLFFEKTILDENGNANFNTYRTGTFSLDSICEHQRIYKKINN |
| 3WD8 Chain:A ((28-401)) | -PASILAIGTANPPTCFNQSDYPDFYFRVTDCEHKTELKDKFKRICDRSAVKKRYLHVTEEVLKENPSMRSYNAPSLDARQALLIEQVPKLGKEAAAKAIKEWGQPLSKITHLVFSAMAGVD-IPGADLRLMNLLGLEPSVKRLMIYSQGCFIGGAAIRCAKDFAENNAGARVLVVFSDIMNMYFHEPQEAHLDILVGQAVFGDGAAAVIVGADPEVSIERPLFHVVSSTQMSVPDTNKFIRAHVKEMG--MELYLSKDVPATVGKNIEKLLVDAVSPFGISDWNSLFYSVHPGGRAILDQVELNLGLG----------KEKLRASRHVLSEYGNMGGSSVYFILDEIRKKSMQEA-KPTTGDGLEWGVLFAIGPGLTVETVILLSVPI------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WD8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -169998 for 2740 contacts (-62.0/contact) +
2D Compatibility (PS) -32820 + (NN) -13934 + (LL) 5876
1D Compatibility (HY) -10800 + (ID) 2650
Total energy: -224326.0 ( -81.87 by residue)
QMean score : 0.413
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