Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVTIKDVAAKAGVNPSTVSRVLKDNASISSKTKERVKKAMEELGYVPNVAAQMLASGLTQNIGVIFPPLVLPDRLSEPFFMEILSTLTNEAKEHGFTVSIATSMSSEELLEQVKLMHLQKRVDGFIVLYSDQKDPIREYLLKYKLPFVVVGAANGYENEITYIDNDNQLMGKSAIDYLYKKGHKSIQFVTDDLNSEVSEERYLGYFKGARKLGLNQ---KPA--LLFDRGNPQVLEEFINRVKEEETTALIVIGDTVSVRVMQFLSFYKLKVPDDISIMTFNNSLFSHLIHPYLSTFDINVNNLGRTSVRRLIDIIKSPDKVFSETIIVPFTLEERESVRDISKNNN |
| 3K4H Chain:A ((7-288)) | ---------------------------------------------------------TTKTLGLVMPSSA-SKAFQNPFFPEVIRGISSFAHVEGYALYMSTGETEEEIFNGVVKMVQGRQIGGIILLYSRENDRIIQYLHEQNFPFVLIGKPYDRKDEITYVDNDNYTAAREVAEYLISLGHKQIAFIGGGSDLLVTRDRLAGMSDALKLADIVLPKEYILHFDFSRESGQQAVEELMGLQQ--PPTAIMATDDLIGLGVLSALSKKGFVVPKDVSIVSFNNALLSEIASPPLSTVDVNIYQLGYEAAKALVDKVENAES-TAKCIIIPHKLLKRQTCEGHH---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3K4H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -169097 for 2431 contacts (-69.6/contact) +
2D Compatibility (PS) -30180 + (NN) -12966 + (LL) 4620
1D Compatibility (HY) -17600 + (ID) 3950
Total energy: -229173.0 ( -94.27 by residue)
QMean score : 0.470
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