Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTIKKVLSVTGIILVTVASLAACSSKSHTTKTGKKEVNFATVGTTAPFSYVKDGKLTGFDIEVAKAVFKGSDNYKVTFKKTEWSSVFTGIDSGKFQMGGNNISYSSERSQKYLFSYPIGSTPSVLAVPKN-SNIKAYNDITGHKTQVVQGTTTAKQLENFNKKHQKNPVTLKYTNENITQILTNLSDGKADFKLFDGLTVNAIIKNQGLTNLKTIPLTMRDQPYIY-FIFGQDQKDLQKYVNNCLKQLRKDGTLSKIAKEYLGGDYVPNEKDLVTPKEK |
| 1WDN Chain:A ((4-224)) | -----------------------------------KLVVATDTAFVPFEFKQGDLYVGFDVDLWAAIA-KELKLDYELKPMDFSGIIPALQTKNVDLALAGITITDERKKAIDFSDGYYKSGLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSVDYAKANIK-----TKDLRQFP-NIDNAYMELGTNRADAVLHDTPNILYFIKTAGNGQFKAVGDSL--EAQQYGIAFPKGSDELRDKVNGALKTLRENGTYNEIYKKWFGTEPK------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WDN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -71978 for 1808 contacts (-39.8/contact) +
2D Compatibility (PS) -24463 + (NN) -12361 + (LL) 3764
1D Compatibility (HY) -12400 + (ID) 2500
Total energy: -119938.0 ( -66.34 by residue)
QMean score : 0.469
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