Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTNETPFSK--NAEMYRDEKVFAEGEDLGLMIKTAEC----RAEHRVLDIGAGAGHTALAFSPY-------VQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPDDSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDHYAPED-PVLDEFVNHLNR---------LRDPSHVRESSLSEWQAMFSANQLAYQDIQKWNL--PIQYDSWIKRGGTPADRE--KQI-ITHLNHASD----EARDTFCI-TLNQNGQPISFCLKAILIQGIKR
5EGP Chain:A ((36-314))----NMFQTKSFVDRYKYTEK-LTGLYAQTLVDYSGVANTSQKPLVVLDNACGIGAVSSVLNHTLQDEAKKTWKLTCGDLSEGMLETTKRRLQDEGWVNAETKIVNALDTGLPDGHYTHVFVAFGFQSFPDANAALKECFRILASGGILASSTWQNFNWIPIMKAAIETIPGNLPFPTQKEFITLHNAGWDSESYIQSELEKLGFRDVKVIPVPKETSIPIDEFFEVCMMIIPYLLPKFWTEEQRESHEKDVPMVLRQYLQDTYGA-N-GQVPLEAVALITTGLKP


General information:
TITO was launched using:
RESULT:

Template: 5EGP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1312 -133818 -102.00 -543.98
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -102.00
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.350

(partial model without unconserved sides chains):
PDB file : Tito_5EGP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5EGP-query.scw
PDB file : Tito_Scwrl_5EGP.pdb: