Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQVNMTVNGEPVTAEVEPRMLLVHFLRDQLRLTGTHWGCDTSNCGTCVVEVDGVPVKSC-TMLAVMASGHSIRTVEGLAGPDGQLDPVQEGFMRCHGLQCGFCTPGMLITARALLDRNPDPDEQTIREAISGQ--ICRCTGYTTIVRSIQWAAAHQTVKAQS
3FC4 Chain:A ((2-154))
IQKVITVNGIEQNLFVDAEALLSDVLRQQLGLTGVKVGCEQGQCGACSVILDGKVVRACVTKMKRVADGAQITTIEGVGQPE-NLHPLQKAWVLHGGAQCGFCSPGFIVSAKGLLDTNADPSREDVRDWFQKHRNACRCTGYKPLVDAVMDAAA--------
General information:
TITO was launched using:
RESULT:
Template:
3FC4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -130931 for 1221 contacts (-107.2/contact) +
2D Compatibility (PS) -15767 + (NN) -4089 + (LL) 536
1D Compatibility (HY) -12400 + (ID) 3100
Total energy: -165751.0 ( -135.75 by residue)
QMean score : 0.568
(partial model without unconserved sides chains):
PDB file :
Tito_3FC4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FC4-query.scw
PDB file :
Tito_Scwrl_3FC4.pdb
: