Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------MAVSQPAISKTLKELEEILGARLFERSKAGAELTEAGVTFLRYAGPCVQALRDGVNTLRGHEA-QVETVRVGVLSTVESLVVPEVIRRLHRRHGALVVSVATGPSAYLLAQLKVGELDLVVGRMTDSPDIQGLTFEHLYSESMMLVVRPGHPLLAAPLGDLQRLAEFPLVLPLAG--TTIRRHADSLFVQWGIALAGQRLETLSPTLSRSYVLRSEAIWVAPRDAVRLDVGNGELAELDLGIREPGGSVGLCHNAALPLPLGAQWFSAVLREVAAELH |
| 1IZ1 Chain:A ((1-292)) | MEFRQLKYFIAVAEAGNMAAAAKRLHVSQPPITRQMQALEADLGVVLLERSHRGIELTAAGHAFLEDARRILELAGRSGDRSRAAARGDVGELSVAYFGTPIYRSLPLLLRAFLTSTPTATVSLTHMTKDEQVEGLLAGTIHVGFSRFFPRHP--GIEIVNIAQEDLYLAVHRSQSGKFGKTCKLADLRAVELTLFPRGGRPSFADEVIGLFKHAGIEPR-IARVVEDATAALALTMAGAASSIVPASVAAIRWPDIAFARIVG--TRVKVPISCIFRKEKQPPILARFVEHVRRSA----- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1IZ1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -152083 for 1992 contacts (-76.3/contact) +
2D Compatibility (PS) -27667 + (NN) -7309 + (LL) 796
1D Compatibility (HY) -9200 + (ID) 2700
Total energy: -198163.0 ( -99.48 by residue)
QMean score : 0.323
|
|
|