Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPR---GAFPPR-GPRPVQ-SVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDEGNPE |
4BGQ Chain:A ((11-301)) | --MNKFEILGVVGEGAYGVVLKCRHKETHEIVAIKKFK----------VKETTLRELKMLRTLK---QENIVELKEAFRRR-----GKLYLVFEYVEKNMLELLEEMPN-GVPPEKVKSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSE---------TRWYRSPELLLGAPYGKSVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPSEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILNSVLLDLMKNLLKLDPADRYLTEQCLNHPTFQTQ----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BGQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -152020 for 2069 contacts (-73.5/contact) +
2D Compatibility (PS) -28802 + (NN) -14747 + (LL) 592
1D Compatibility (HY) -26400 + (ID) 4850
Total energy: -226227.0 ( -109.34 by residue)
QMean score : 0.439
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