Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKCDLPSRTVDTKQAQDLARSYGIPFIETSAKTRQRVEDAFYTLVREIRQYRLKKISKEEKTPGCVKIKKCIIM
6Q21 Chain:A ((1-171))
MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLAARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLVREIRQHKLRKL------------------
General information:
TITO was launched using:
RESULT:
Template:
6Q21.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -97800 for 1378 contacts (-71.0/contact) +
2D Compatibility (PS) -18502 + (NN) -4735 + (LL) 1364
1D Compatibility (HY) -23600 + (ID) 7900
Total energy: -151173.0 ( -109.70 by residue)
QMean score : 0.480
(partial model without unconserved sides chains):
PDB file :
Tito_6Q21.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-6Q21-query.scw
PDB file :
Tito_Scwrl_6Q21.pdb
: