Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALKSLVLLSLLVLVLLLVRVQPSLGKETAAAKFERQHMDSSTSAASSSNYCNQMMKSRNLTKDRCKPVNTFVHESLADVQAVCSQKNVACKNGQTNCYQSYSTMSITDCRETGSSKYPNCAYKTTQANKHIIVACEGNPYVPVHFDASV
3EUY Chain:B ((1-124))
--------------------------KETAAAKFERQHMDSST----SSNYCNQMMKSRNLTKDRCKPVNTFVHESLADVQAVCSQKNVACKNGQTNCYQSYSTMSITDCRETGSSKYPNCAYKTTQANKHIIVACEGNPYVPVHFDASV
General information:
TITO was launched using:
RESULT:
Template:
3EUY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44854 for 853 contacts (-52.6/contact) +
2D Compatibility (PS) -13258 + (NN) -7353 + (LL) 3368
1D Compatibility (HY) -14000 + (ID) 6000
Total energy: -82097.0 ( -96.25 by residue)
QMean score : 0.392
(partial model without unconserved sides chains):
PDB file :
Tito_3EUY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EUY-query.scw
PDB file :
Tito_Scwrl_3EUY.pdb
: