Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVRPLNCIVAVSQNMGIGKNGDLPWPPLRNEFQYFQRMTTVSSVEGKQNLVIMGRKTWFSIPEKNRPLKDRINIVLSRELKEPPKGAHFLAKSLDDALELIEDPELTNKVDVVWIVGGSSVYKEAMNKPGHVRLFVTRIMQEFESDAFFPEIDFEKYKLLPEYPGVPLDVQEEKGIKYKFEVYEKNN
3NXR Chain:A ((1-186))-VGSLNCIVAVSQNMGIGKNGDLPWPPLRNEFRYFQRMTTTSSVEGKQNLVIMGKKTWFSIPEKNRPLKGRINLVLSRELKEPPQGAHFLSRSLDDALKLTEQPELANKVDMVWIVGGSSVYKEAMNHPGHLKLFVTRIMQDFESDTFFPEIDLEKYKLLPEYPGVLSDVQEEKGIKYKFEVYEKND


General information:
TITO was launched using:
RESULT:

Template: 3NXR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -118954 for 1396 contacts (-85.2/contact) +
2D Compatibility (PS) -20359 + (NN) -11304 + (LL) 208
1D Compatibility (HY) -25200 + (ID) 8100
Total energy: -183709.0 ( -131.60 by residue)
QMean score : 0.680

(partial model without unconserved sides chains):
PDB file : Tito_3NXR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3NXR-query.scw
PDB file : Tito_Scwrl_3NXR.pdb: