Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLNKPVIMGRHTWESIGRPLPGRKNIILSSQPGTDDRVTWVKSVDEAIAACGDVPEIMVIGGGRVYEQFLPKAQKLYLTHIDAEVEGDTHFPDYEPDDWESVFSEFHDADAQNSHSYCFEILERR
1RB3 Chain:B ((1-159))
MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLDKPVIMGRHTWESIGRPLPGRKNIILSSQPGTDDRVTWVKSVDEAIAACGDVPEIMVIGGGRVYEQFLPKAQKLYLTHIDAEVEGDTHFPDYEPDDWESVFSEFHDADAQNSHSYCFEILERR
General information:
TITO was launched using:
RESULT:
Template:
1RB3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -118065 for 1176 contacts (-100.4/contact) +
2D Compatibility (PS) -17456 + (NN) -9969 + (LL) 0
1D Compatibility (HY) -22400 + (ID) 7900
Total energy: -175790.0 ( -149.48 by residue)
QMean score : 0.777
(partial model without unconserved sides chains):
PDB file :
Tito_1RB3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1RB3-query.scw
PDB file :
Tito_Scwrl_1RB3.pdb
: