Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPRRSLHAAAVLLLVILKEQPSSPAPVNGSKWTYFG--P----DGENSWSKKYPSCGGLLQSPIDLHSDILQYDASLTPLEFQGYNLSANKQFLLTNNGHSVKLNLPSDMHIQ--GLQSRYSATQLHLHWGNPNDPHGSEHTVSGQHFAAELHIVHYNSDLYPDASTASNKSEGLAVLAVLIEMGS-FNPSYDKIFSHLQHVKYKGQEAFVPGFNIEELLPERT--AEYYRYRGSLTTPPCNPTVLWTVFRNPVQISQEQLLALETALYCTHMDDPSPREMINNFRQVQKFDERLVYTSFSQVQVCTAAGLSLGIILSLALAGILGICIVVVVSIWLFRRKSIKKGDNKGVIYKPATKMETEAHA |
| 3FW3 Chain:A ((5-266)) | -------------------------------WCYEVQAESSNCLVPVKWG---GNCQKDRQSPINIVTTKAKVDKKLGRFFFSGYDKKQ--TWTVQNNGHSVMMLLENKASISGGGLPAPYQAKQLHLHWSDLPY-KGSEHSLDGEHFAMEMHIVHEKEK----------PEDEIAVLAFLVEAGTQVNEGFQPLVEALSNIPKPEMSTTMAESSLLDLLPKEEKLRHYFRYLGSLTTPTCDEKVVWTVFREPIQLHREQILAFSQKLYYDKEQT---VSMKDNVRPLQQLGQRTVIKS------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FW3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -123897 for 1919 contacts (-64.6/contact) +
2D Compatibility (PS) -25263 + (NN) -13341 + (LL) 7940
1D Compatibility (HY) -20400 + (ID) 4350
Total energy: -179311.0 ( -93.44 by residue)
QMean score : 0.409
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