Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDAVSSDRNFPNSTNLPRNPSMADYEARIFTFGTWIYSVNKEQLARAGFYALGEGDKVKCFHCGGGLTDWKPSEDPWEQHAKWYPGCKYLLEQKGQEYINNIHLTHSLEECLVRTT
4EC4 Chain:B ((8-113))
--------RNFPNSTNLPRNPSMADYEARIFTFGTWIYSVNKEQLARAGFYALGEGDKVKCFHCGGGLTDWKPSEDPWEQHAKWYPGCKYLLEQKGQEYINNIHLTHSLEECLV---
General information:
TITO was launched using:
RESULT:
Template:
4EC4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30932 for 729 contacts (-42.4/contact) +
2D Compatibility (PS) -11621 + (NN) -7790 + (LL) 512
1D Compatibility (HY) -14400 + (ID) 5300
Total energy: -69531.0 ( -95.38 by residue)
QMean score : 0.458
(partial model without unconserved sides chains):
PDB file :
Tito_4EC4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4EC4-query.scw
PDB file :
Tito_Scwrl_4EC4.pdb
: