Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKEQKCLFVTIAGLPNAGKSTLINSITGKKIAIVTPKVQTTRTQIRGIAIYNETQIIFTDSPGIFSAETKLEKALVKSAWSAIKGDDVILLLIDASSYLKNIERIKTIFTRLRH--TKTKCIFVINKIDLVKKPELKMTYKHLDLLYKLKKIFTISALKSDGLSDLMDYLSEVAPVSPWFYGEDQV-TDSSTSFLSAEITREKLFLNLREELPYSTAVITEQFEEKKDESLVIKQVIFVLKDSHKKIVLGKGGSNIKKIGIEARIELEKLFERKVHLFLFVKVRP-WTDRPEEYIDDV |
| 1WF3 Chain:A ((3-291)) | -EKTYSGFVAIVGKPNVGKSTLLNNLLGVKVAPISPRPQTTRKRLRGILTEGRRQIVFVDTPGLHKPMDALGEFMDQEVYEALADVNAVVWVVDLRHPPTPEDE--LVARALKPLVGKVPILLVGNKLDAAKYPEE--AMKAYHELLPEAEPRMLSALDERQVAELKADLLALMPEGPFFYPEDYAKSDQTFGEWVAEILREEAMKRLWHEVPYAVATKVEEVAERENGVLYIKAILYVERPSQKAIVIGEGGRKIKEIGQATRKQLEALLGKKVYLDLEVKVYPDWRKDPEALRELG |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WF3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -155236 for 2304 contacts (-67.4/contact) +
2D Compatibility (PS) -30868 + (NN) -9312 + (LL) 748
1D Compatibility (HY) -14400 + (ID) 4850
Total energy: -213918.0 ( -92.85 by residue)
QMean score : 0.474
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