Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFNSLLVFDIETIPDVNSCRNLLNISDDSSLKEKRNALTKYHLEITNGQNPFLRQPFHQVIVISFLLCSVTYQSNYEVFTLQEIRSEGTLDSSEKELVKGFFNCVSEKKPRLISFNGRTFDIPVLKYRAMVHDVQAEYFHKAGDKWNSYNQRYSSNWHCDLLESLSDFGAFARVKMNEVCAVFNLPGKIGVDGSQVVDLYDSGRI-QEIRDYCETDVVNTYLIYLRFMHHQGRITTRSYNKNIEELLLECEKKAHLRKFKEEWEITCGGRFCVEFK |
1T7P Chain:A ((1-204)) | ----MIVSDIEA-------------------NALLESVTKFHCGVIYDYSTAEYVSYRPSDFGAYLDALEAEVARGGLIVFHNGHK------YDVPALTKLAKLQLNREFHL--PRENCIDTLVLSRLIHSNLKDTDM----GLLRSGKLPGALEAWGYRLGEMKGEYKDDFKRMLEE-------------QGEEYVDGMEWWNFNEEMMDYNVQDVVVTKALLEKLLSDKHYFPPE----------IDFTDVGYTTFWSESLEAVDIEHRAAWLL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1T7P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -34296 for 1545 contacts (-22.2/contact) +
2D Compatibility (PS) -20926 + (NN) -1824 + (LL) 2932
1D Compatibility (HY) -4000 + (ID) 1400
Total energy: -59514.0 ( -38.52 by residue)
QMean score : 0.156
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