Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MSNF-CKIIYGNNDNQ-LSEKSYKSSVCNDDLFNGNEEDFVILENEKMYKTKAEFESEGYKII------- |
3UP6 Chain:A ((35-358)) | TRAQLSIDLVNNVEQQEKINSMRFIVFGSTPGGVRLDVNEHILLSTPETATDIDAQLLEVTSSNDILVVVIANEPQSLTSQLDGIANLLTLQEMIYDISSILNSDGQIISATGMPMTGVIRDISIAPDETKTVQMVIERAVARVDVFIEAIDGGAVTGYTAGSTSVTLHNFSHDSYFVMGNVGNGTRDNADSSKNYGKVKEDVSESNLLTHSWTAATTETWAYSSAPGAENRKLLCSFYTAERLFKSDYSDRLSISMANVLKGPSDVTGITGKVIESVTKVDGTGSPTAQPFTEIRRNNVYQVTARVGKIGIQILTISVEDW |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UP6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 13685 for 292 contacts (46.9/contact) +
2D Compatibility (PS) -6431 + (NN) -489 + (LL) 0
1D Compatibility (HY) 1600 + (ID) 200
Total energy: 8165.0 ( 27.96 by residue)
QMean score : 0.156
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