Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEFAVEQAKLAKKNDEIPIGAVIVSGDN-IISFAHNI---SNDPTAHAEMLVIRQACELLSTSVLCNADMYVTLEPCPMCAQAISFARIKRLYFGAYNSKGGGIENGAKIFQ--FCSHVPEVYGGVLETECSFLLKDFFEKLRDSTNYY
2A8N Chain:A ((8-131))
MELALVEARSAGERDEVPIGAVLVL-DGRVIARSGNRTRELNDVTAHAEIAVIRMACEALGQERLPGADLYVTLEPCTMCAAAISFARIRRLYYGAQDPKGGAVESGVRFFSQPTCHHAPDVYSG------------------------
General information:
TITO was launched using:
RESULT:
Template:
2A8N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -95683 for 991 contacts (-96.6/contact) +
2D Compatibility (PS) -13068 + (NN) -9668 + (LL) 1716
1D Compatibility (HY) -10000 + (ID) 3350
Total energy: -130053.0 ( -131.23 by residue)
QMean score : 0.444
(partial model without unconserved sides chains):
PDB file :
Tito_2A8N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2A8N-query.scw
PDB file :
Tito_Scwrl_2A8N.pdb
: