Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKTILAVETSCDETAVAIVNSEKQVLAQEILSQTEHKKRGGVIPEIASRAHMEHLSSLIKNSIEKSNLNFCNLDATAATSGPGLIGGLIVGTMMAKAIAHVTQKPFIAVNHLEAHVLVIRLLYEVKFPFLVLLISGGHCQFLIAQNVGKYIKLGETLDDSLGEAFDKVARMLGLSYPGGPLIEKLAKKGNGTRFKLPRAMRKRPGCNFSFSGIKTAVKNLVQELEMSEQDVCDVCASFQECISEILLDRVKNAVIMAESLNIKINDFVVTGGVAANNFLRKKLKKHINL---NILFPPINLCTDNAVMVGWTGIEILQKDYIDSLNFA-PRPRWELGSY----- |
2IVN Chain:A ((1-325)) | -MLALGIEGTAHTLGIGIVSEDK---VLANVFDTLTTEKGGIHPKEAAEHHARLMKPLLRKALSEAGVSLDDIDVIAFSQGPGLGPALRVVATAARALAVKYRKPIVGVNHCIAHVEITKMFGV--KDPVGLYVSGGNTQVLALEG-GRYRVFGETLDIGIGNAIDVFARELGLGFPGGPKVEKLAEKGE-KYIELPYAVK---GMDLSFSGLLTEAIRKYRS---GKYRVEDLAYSFQETAFAALVEVTERAVAHTEK-----DEVVLVGGVAANNRLREMLRIMTEDRGIKFFVPPYDLCRDNGAMIAYTGLRMYKAGISFRLEETIVKQKFRTDEVEIVWH |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2IVN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -234587 for 2927 contacts (-80.1/contact) +
2D Compatibility (PS) -34109 + (NN) -15504 + (LL) 2052
1D Compatibility (HY) -15600 + (ID) 5100
Total energy: -302848.0 ( -103.47 by residue)
QMean score : 0.495
|
|
|