Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAVMPDKWIREKAES-FGMIEPFVD-HKSSKGVMSFGLSSYGYDARVDNKFKIFTNVNSAVVDPKDFSK----------NSFIDK-ETDVCIIPPNSFALASTVEYFHIPRDVLAICVGKSTYARCGIIVN--VTPLEPGWKGHVTLEFSNTTPLPAKIYANEGACQFVFLSGESECEKSYDD-IKGKYMNQHGITLPLVK
1XS1 Chain:A ((1-191))
-MRLCDRDIEAWLDEGRLSINPRPPVERING---------ATVDVRLGNKFRTFRGHTAAFIDLSGPKDEVSAALDRVMSDEIVLDEGEAFYLHPGELALAVTLESVTLPADLVGWLDGRSSLARLGLMVHVTAHRIDPGWSGCIVLEFYNSGKLPLALRPGMLIGALSFEPLSGPAVRPYNRREDAKYRNQQGAVASRID
General information:
TITO was launched using:
RESULT:
Template:
1XS1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -87605 for 1262 contacts (-69.4/contact) +
2D Compatibility (PS) -18790 + (NN) -5582 + (LL) 488
1D Compatibility (HY) -5600 + (ID) 2250
Total energy: -119339.0 ( -94.56 by residue)
QMean score : 0.437
(partial model without unconserved sides chains):
PDB file :
Tito_1XS1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XS1-query.scw
PDB file :
Tito_Scwrl_1XS1.pdb
: