Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIITIFGPPGSGKGTQSSLLIERYNLKLISVGDLLRNIISSGSELGKKIKDTVESGNLIQDGVICELLYDQLALMD--DNFLFDGFPRNLNQAHFLTQILRERYNRDVDIVIELQLNDKVAIDRLKNRLVCLDC----KSVYSTSSFKDDNNLVCTRCKSARLEKRIDDSDLSAIDRRIGEYHVQVKSLREYY-------RDKLLMIDANLNVDQVKQEIESKISCSLV
4K46 Chain:A ((1-214))
MRIILLGAPGAGKGTQAQFIMAKFGIPQISTGDMLRAAIKAGTELGKQAKSVIDAGQLVSDDIILGLVKERIAQDDCAKGFLLDGFPRTIPQADGLKEV-----GVVVDYVIEFDVADSVIVERMAGRRAHLASGRTYHNVYNPPKVEGKDDVT-----GEDLVIREDDKEETVL-ARLGVYHNQTAPLIAYYGKEAEAGNTQYLKFDGTKAVAEVSAELEKALA----
General information:
TITO was launched using:
RESULT:
Template:
4K46.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -72797 for 1527 contacts (-47.7/contact) +
2D Compatibility (PS) -21409 + (NN) -3491 + (LL) 1220
1D Compatibility (HY) -15200 + (ID) 3500
Total energy: -115177.0 ( -75.43 by residue)
QMean score : 0.474
(partial model without unconserved sides chains):
PDB file :
Tito_4K46.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4K46-query.scw
PDB file :
Tito_Scwrl_4K46.pdb
: