Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGYVINIQAIKKQIELSPQSCGVYQMIGDKDKVLYVGKAKNLKSRLSNYLRYENLSERTKFMLSQVIKVEVLVTENEIDALLLEARLIKSLKPPYNIIFKDGRSYPYIVISKHNYPRIAQYRGKFKKGEFHYYGPFISVAAVKQTMLSLQKTFLLRVCSDQYFASTKRPCIEYQIKRCSAPCVGKITKDDYCQSVKQTRDTLLGRNEKVKKQLSSTMEKCSKEENYELAAIYRDRLKFLEQIQMQSMDFSFEKDADFFGIARKEDLACIGVLSFRNKDNYGSTPYFVENCSDHPDDEILSTFLIKLYNSANIPPAQIYVSDFVTGKEIIEQALHNVTHKPIKALHAKSKKEHNLLKFVYDNSQRSLEQKLTDYKNNLEKFEELSKIFLLPNIPKRVEVYDNSHTSGNQQVGVMVVAGKEGFLKSEYRKFTIKGEILGDDYEMMREVLTRRFSNNTKD--VVPDFLLIDGGPGHISVVQNVLNTLNI-NVPFACMAKGSYRNAGNERFYMPNREDFTLKNDSKVMLYLQSLRNEAHRFAITSHRKKRDKQFFVSPLSKITSIGDKRKNALMSHFGSVENISKASLAEIQNVARISKELAEVILKHVDNKE |
| 3C65 Chain:A ((-4-523)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LGERLGIPA-PRRIEAFDNSNIYGADPVSALVVFLDGKPAKKEYRKYKVKTVAGPNDYETMREVVRRRYTRVLKEGLPLPDLIIIDGGKGHLSAVRDVLENELGLDVPLAGLSE---------LLAGDPPDVVPLDRQSQEFYLLQRIQDEVHRFAVM--------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C65.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4958 for 1079 contacts (-4.6/contact) +
2D Compatibility (PS) -15023 + (NN) -3686 + (LL) 32804
1D Compatibility (HY) 8000 + (ID) 550
Total energy: 16587.0 ( 15.37 by residue)
QMean score : 0.123
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