Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSRIPFLLILIIVIASLPVINNWLSYHNQTLNDDYIGERLDNYISRNFDKIIKILREESIKSNYAARDNATKGKILQYENKIFDLAYPYLGNENSNIIAVGFFDYSCGYCKAIKDDIKQLI-NDGKIKYIFRDTPILG-------------------------------------------NNSLKAAKSALAVYFIDKGKYFDFHYAILDHK----GEF-SDENILDIVKSIGINEDNFNNSMKNN---AGKIEQMINDSKFLVRELGAGGTPFLIIG--DS--LFIGATDLDVLRKKVDELSHKQN |
| 3RPP Chain:A ((3-216)) | ---------------------------------------------------------------------------------------------PLPRTVELFYDVLSPYSWLGFEILCRYQNIWN-INLQLRPSLITGIMKKPPGLLPRKGLYMANDLKLLRHHLQIPIHFPKDFLSVMLEKGSLSAMRFLTAVNLEHPEMLEKASRELWMRVWSRNEDITEPQSILAAAEKAGMSAEQAQGLL--EKIATPKVKNQLKETTEAACRYGAFGLPITVAHVDGQTHMLFGSDRMELLAHLLGEKWMGPI |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3RPP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -82543 for 1214 contacts (-68.0/contact) +
2D Compatibility (PS) -16705 + (NN) -7982 + (LL) 6780
1D Compatibility (HY) -2800 + (ID) 1150
Total energy: -104400.0 ( -86.00 by residue)
QMean score : 0.507
|
|
|