Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKVECAVDSGFATLPVLPLRDVVIFPNIVVPLFIGREKSISALEYAINNRSRQNEIFLVAQQDGSIDNPEPKDLYEVGVLANIVQPLIKLPDNAVKVVIQGVSRGKVIEYIDSHALLQARVELDSYHEYEESEDNVDLEALRRAVINAFDSWCKLNKKNHPEIIVNPVEQIKKIDQLVDTVISYLSIKASDKQSILETYSLEERLKKAFAFIEREISILNAQNRLYKTIKSQVESTQKVYYLNEQLKAIQKELGEFENGEEGNIINEFEKKINEIKLSQEAREKAMTELKRYKKMNPISPEATVISNYLYWLLDLPWGKYKDAKINLNAAKKILDENHYGIEKVKDRIIEFLAVLKRVKEIKGPILCLVGPPGVGKTSLAKSMARAVGRDFVRIALGGVRDESEIRGHRKTYIGSMPGKIIQHMKKANSCNPLFLLDEIDKMGSDSRGDPASALLEVLDTEHNKHFTDHYLEVEFNLSSVMFVATANSLNLPHPLRDRMEIIQLSGYTEDEKINIAKYHLIPKLKKEHGLRQREWGITNDALYELIRLYTRESGVRSMERELAKLMRKAVKEILAGQNKKISVGVDNLQDYLGVRKYTFGIAEKDSLVGVVTGLAYTETGGDILMIESVLIPGKGEIKYTGKLGEVMQESIKAAYSYVRSNCLFFGIKPEKFKNNDIHLHLPEGAVPKDGPSAGSAVCTSIVSLMTNIPINKNVAMTGEVTLRGRVLAIGGLREKLLAALRGSIKTVIIPGENEKDMQEIPANIKKEINVVFVKNIDEVIKIALIRPTIPIESDNGSSALFSL |
1RRE Chain:E ((10-187)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RVGQVTGLAWTEVGGDLLTIETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKLGINPDFYEKRDIHVHVPEGATPKDGPAAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAAHRGGIKTVLIPFENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQNEPSGMQVVTAK------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RRE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -152720 for 1529 contacts (-99.9/contact) +
2D Compatibility (PS) -19991 + (NN) -9789 + (LL) 45452
1D Compatibility (HY) -17600 + (ID) 5200
Total energy: -159848.0 ( -104.54 by residue)
QMean score : 0.635
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