Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNLNEQPDVLTFLNSNLKGISKFHFGILSKLCGGNKVMDLLFYRPLSYVDRSKSLLDARVGELTTFIAKIYEHQPPTFRGRPYKIVVESKSQYIFIVFFNYSIKYLYKLFPIGANVIISGKLEKFAEHWQVTHPDYVLLDTNQFEEIARVEPVYQLCRGITNKSIRNIINSNLKELPDLPEWIGDTLIKQNKWLSWKESIIKLHRPNSLAEAEICRRRLAYDELFAYQMALKLARENHVRKRGREFTISNKYKEQVLNELSF-QLTNDQIRAIDEISERQKSKCRMVSLLQGDVGSGKTVVALFAMLNVIE---NNMQAALMAPTTILAEQHYNWIEEALSYTD-IKIALLTGKTTRKERKIITNELASGILKIIIGTHALFQAN------VTFKNLGLAVIDEQQRFGVIQ--RNC---LVG-KGENADILFVTATPIPRTLQQAIYGDVEC--SILREKPKSRLPIKTVAMNIKKLVEVIEKLKSAI--NRGEKAYWICPCIGGNEGLNIAAAEMRFQELQKTFFN-KVGIIHGKLTQVQKDQVMFSFKRNEFPLLVATTVIEVGIDVPDATIMIIENAEQF-----GLSQLHQLRGRVGRGNKPSFCVLLYNNISKSSFSKLKIMCESQDGFYIAEKDMMLRGSGDILGLKQSGCMEFKFADLYKDRELLNLAYNNTKSAIAENKSFELLLDIFEYRSRLHFSKFQ |
3FHT Chain:A ((40-378)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VYAMGFNRPSKIQENALPLMLAE----PPQNLIAQSQSGTGKTAAFVLAMLSQVEPANKYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNK-------LERGQKISEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNVIKLKREEETLDTIKQYYVLCSSRDEKFQALCNLYGAITIAQAMIFCHTR--------KTASWLAAELSK--EGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERL------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FHT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -207733 for 2534 contacts (-82.0/contact) +
2D Compatibility (PS) -33940 + (NN) -10931 + (LL) 24924
1D Compatibility (HY) -9200 + (ID) 3350
Total energy: -240230.0 ( -94.80 by residue)
QMean score : 0.359
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